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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954445.1_cds_XP_016493307.1_83430
CDS Infomation

[gene=LOC107812671] [db_xref=GeneID:107812671] [protein=ubiquitin carboxyl-terminal hydrolase 12-like] [protein_id=XP_016493307.1] [location=complement(join(13601..13663,14766..14876,15047..15115,15197..15305,15676..15764,15888..15965,16822..16944,17384..17503,17592..17672,23669..23779,23924..23992,24076..24184,26182..26270,26395..26460,27378..27500,28006..28125,28215..28295,30012..30035))] [gbkey=CDS]
Sequence

ATGACTCTACTCGCTCCTCATTCGATAACACTGAAGAAAGAGCAAGAAGAAAAGGAAAAA
AAGAGAAAGGAGAAAGTAGAAGATGGTCTCTACACAATCATCAAGGTTGCTCGTGATGAA
GACCTCGCTGAACAAATTGGAAAGGAGATGTATTTTGATCTTGTGGATCATGATAAAGTG
CATGCTTTTCATATTCAGAAACAGATGCCATTTACTCAATTCAAGGATGTAGTAGCTAAG
GTATTTCGTATCCCGGTACAATTTCAACGCTACTGGCTATGGGCGAAACGTCAGAACCAT
ACTTATCGGCCTGATCGTGCATTGACAGTTCAAGAGGAAGTTCAATCCGTTGGTCAACTG
AGAGAAGGAAATACTGCTGAGCTAAAACTGTTTCTGGAAGTTGAATTATGCCTGGATTTG
CGACCTTTTCCTCCACCTGAGAAGACCAAGGAAGATATCATTCTATTTTTCAAATTTTAT
GACCCTCTCAAAGAGAAGATTAGGTATGTCGGACGGCTTCTTGTAAAAGAAAGTGGCAAG
CCGTTGGAGATATTAACAAAGATTAATGAGTTGGTTGGCTTTTCGCCTGATGAAAAAATT
GAACTTTTTGAGGAAATAAAATTTGAACCCAACGTTATCTGTGAACGCATTGACAGTAAG
CGGAGTTTTCGTGACTGTGAGATAGGAGATGGGGATATAATTTGCTTTCAGAAATCCCTT
CAAAATCAATGCAGTGAACAATACCGCTTTCCTGAGGTTCCTTCATTTTTGGAGTACATG
CACAACCTCCAGATAAAACGAAATAAAGGCCAAGAAGAACCGGAACAGAAGAAAAAAGAA
AAAGCAGAAGCTCATCTCTACAAAATCATCAAGGTAGCTCGTGATGAAGACCTCGGTGAA
CAAATTGGAAAGGAGATTTATTTTGATCTTGTGGATCATGATAAAGTGCACAGTTTTCGT
ATTCGGAAACAGATGCCTTTTACTCTATTCAAGGAGGAAGTTGCTAGGGAATTTGGTATA
CCGGTGCAATTTCAACGTTACTGGCTATGGACAAAACGCCAAAACCATACATATCGTCCT
AATCGTCCATTGACAGCTCAAGAAGAAATTCAATCCGTTGATCAACTGAGAGAGGTTTCA
GATAAAGGGAATAGTGCTGAGCTAAAACTGTTTCTGGAAGTGGATTTATGCCTGGATTTG
CGACCTTTTGCTCCACCAGGAACGACCAAGGAAGAAATCCTTCTATTTTTTAAACTTTAT
GACCCTCTGAAAGAGAAGATAAGGTATGTTGGACGGCTTTTTGTAAAAGGAAGTGGCATG
CCGCGGGAGATATTAACAAAGCTAAATAAGTTAGCTGGCTTTTTGCCGGATGAAGAAATT
GAACTTTTTGAGGAAATAAAATTTGAACCCAATGTGATGTGTGAACACATTGACAGTAAT
CTGAGTTTTCGCGGTAGTCAGCTTGGAAATGGGGATATTATTTGCTTTCAGAAATCCCTT
CGAAATCAAGACAGTGACCAATATCGCTTTCCTGAGGTTCCTTTGTTTTTGGAGTACGTG
CACGATCTCCAGGTTATTAAAGACAGATTCCCTCGAATCCAATCCTTAGAGACGTACTTT
CAGGGAAGGAAATGA

Peptide Sequence

PEP ID

XP_016493307.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Nicotiana tabacum]
Sequence

MTLLAPHSITLKKEQEEKEKKRKEKVEDGLYTIIKVARDEDLAEQIGKEMYFDLVDHDKV
HAFHIQKQMPFTQFKDVVAKVFRIPVQFQRYWLWAKRQNHTYRPDRALTVQEEVQSVGQL
REGNTAELKLFLEVELCLDLRPFPPPEKTKEDIILFFKFYDPLKEKIRYVGRLLVKESGK
PLEILTKINELVGFSPDEKIELFEEIKFEPNVICERIDSKRSFRDCEIGDGDIICFQKSL
QNQCSEQYRFPEVPSFLEYMHNLQIKRNKGQEEPEQKKKEKAEAHLYKIIKVARDEDLGE
QIGKEIYFDLVDHDKVHSFRIRKQMPFTLFKEEVAREFGIPVQFQRYWLWTKRQNHTYRP
NRPLTAQEEIQSVDQLREVSDKGNSAELKLFLEVDLCLDLRPFAPPGTTKEEILLFFKLY
DPLKEKIRYVGRLFVKGSGMPREILTKLNKLAGFLPDEEIELFEEIKFEPNVMCEHIDSN
LSFRGSQLGNGDIICFQKSLRNQDSDQYRFPEVPLFLEYVHDLQVIKDRFPRIQSLETYF
QGRK

Transcript Sequence

Gene sequence data has not been registered.